 |
Job Description | P76129 | Confidence | 99.58% | Date | Thu Jan 5 12:19:21 GMT 2012 |
Rank | 49 | Aligned Residues | 119 |
% Identity | 17% | Template | c3caxA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein pf0695; |
PDBTitle: crystal structure of uncharacterized protein pf0695
|
Resolution | 2.43 Å |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | G | I | F | F | P | A | L | E | Q | N | M | M | G | A | V | L | I | N | E | N | D | E | V | M | F | F | N | P | A | A | E | K | L | W | G | Y | K | R | E | E | V | I | G | N | N | I | D | M | L | I | P | R | D | L | R | P | A | H | P | E | Y | I | R | H | N | R | E | G | G | K | A | R | V | E | G | M | S | R |
Query Conservation |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
N | I | E | E | L | K | A | I | F | E | A | L | P | V | D | V | T | F | I | D | K | D | D | R | V | R | F | F | S | P | G | E | . |
. |
R | I | F | T | R | T | P | S | V | L | G | R | P | V | Q | L | C | H | P | P | K | S | V | Y | V | V | N | K | I | L | K | A | F | K | E | G | . |
. |
. |
. |
. |
R | K | K | E | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |
| T | T | S | B |  |  |  |  |
|
| S | S | . | . |
| S | S |
|
|
| G | G | G | T | T |
| B | T | T | T | S | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | S |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  | . | . |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | |
|
. | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 420 | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | Q | L | E | K | K | D | G | S | K | I | W | T | R | F | A | L | S | K | V | S | A | E | G | K | . |
. |
V | Y | Y | L | A | L | V | R | D | A | S | V | E | M | A | Q | K | E | Q | T | R | Q | L |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
| . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   | . |   |   |   |
| . | . |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
T | F | W | L | . |
R | L | R | E | . |
. |
K | Y | V | Y | I | K | Y | V | P | L | F | N | E | K | G | E | Y | I | G | T | L | E | M | T | M | D | I | A | P | Y | K | K | I | E | G | E | K | R | L | L |
Template Known Secondary structure |   |
 |  |  |  | . |  |  | T | T | . | . |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | T |
|
| S |
|
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  | . |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
424 | . | . | . | |
. | . | 430 | . | |
|
. | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|