Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence85.04%DateThu Jan 5 12:19:21 GMT 2012
Rank159Aligned Residues147
% Identity11%Templatec3bleA_
PDB info PDB header:transferaseChain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   609610.........620.........630.........640 .........650.........660.........670.........680.....
Predicted Secondary structure 






...







Query SS confidence 































. . .












































Query Sequence  RWVIAEACRQLAEWRSQNIHIPALSVNLSALH. . . FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ
Query Conservation    
                      

 
   ...
                      
  

 
               
Alig confidence 



















...








...



















....




















Template Conservation            
  
   
  ...
                            
 
.... 
 
 

 
   
      
 
Template Sequence  KEFFTDVSFVIEYAIKSGLK. . . INVYLEDWSNGFRNSPDYVKSLVEHLSKEHIE. . . . RIFLPDTLGVLSPEETFQGVD
Template Known Secondary structure  TT
...T
TS

S....
TT



Template Predicted Secondary structure 


...











....







Template SS confidence 















































































   121........130.........140 .........150.........160.........170.. .......180.........190...
 
   686...690 ...... ...700.........710.........720.........730.........740.........750.........760
Predicted Secondary structure 
..

...





















Query SS confidence 




. .





. . .































































Query Sequence  ILRDM. . GVGLSV. . . DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE
Query Conservation   
   ..
     ...



 
 

   
       



                   
            




   
Alig confidence 




..





...



















..



.



























...





Template Conservation   
      
 
  
 

  


 

 
 
  


  ..

 
.
 


  


   
 

  
    
   ... 


  
Template Sequence  SLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKG. . LHAS. INGLGERAGNTPLEALVTTIHDKSNSKT. . . NINEIA
Template Known Secondary structure 
TTS

B
TTS
TT
S..B.GGG
SSTT
B
BSS


...


GGG
Template Predicted Secondary structure 











..
.
















...


Template SS confidence 















































































   194.....200.........210.........220......... 230... ......240.........250.........260. ......
 
   761.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  QFEMLRKI
Query Conservation      
   
Alig confidence 







Template Conservation 
       
Template Sequence  ITEASRLV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   268.270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions