Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence65.96%DateThu Jan 5 12:19:21 GMT 2012
Rank263Aligned Residues103
% Identity13%Templatec3b0vD_
PDB info PDB header:oxidoreductase/rnaChain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   671........680......... 690...... ...700.........710.........720.........730......
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Query Sequence  SMMMEHDTEIFKRIQILRD. MGVGLSV. . . . . . . . . DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL. . . .
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Template Sequence  ACLLLDLARVREILKAXGEAVRVPVTVKXRLGLEGKETYRGLAQSVEAXAEAGVKVFVVHARSALLALSTKANREIPPLR
Template Known Secondary structure  GGGGG
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   737..740....... ..750..... ....760.........770....
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Query Sequence  LEAITSIGQSL. NLTVVAEG. VETKEQFEMLRKIHCRVIQ
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Template Sequence  HDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK. RVDGVX
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   185....190.........200.........210....... ..220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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