Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence87.58%DateThu Jan 5 12:19:21 GMT 2012
Rank147Aligned Residues109
% Identity22%Templatec2yxbA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   675....680.........690.........700..... ....710.........720.........730.........740.........750.
Predicted Secondary structure 









...













Query SS confidence 






























. . .













































Query Sequence  EHDTEIFKRIQILRDMGVGLSVDDFGTGFSG. . . LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV
Query Conservation              
   
     



 
 

...   
       



                   
           
Alig confidence 



















..








...















....

























Template Conservation   
  
   
   
   
 

..  

                 


 

 .... 
             
        

Template Sequence  GHDRGAKVVARALRDAGFEV. . VYTGLRQTPEQVAXAAVQEDVDVIGVSI. . . . LNGAHLHLXKRLXAKLRELGADDIPV
Template Known Secondary structure  S

TT
..


SB

TT
S....SSS
TT
TTS
Template Predicted Secondary structure 


..









....










Template SS confidence 















































































   32.......40.........50. ........60.........70......... 80.........90.........100.....
 
   752.......760.........770.........780.........790...
Predicted Secondary structure 















Query SS confidence 









































Query Sequence  VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS
Query Conservation   




       
   
    

     
         
  
Alig confidence 





















....















Template Conservation 



             
 
  ....  

    

   
  
Template Sequence  VLGGTIPIPDLEPLRSLGIREI. . . . FLPGTSLGEIIEKVRK
Template Known Secondary structure 


TT

....
TT

Template Predicted Secondary structure 






....




Template SS confidence 









































   106...110.........120....... ..130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions