Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence71.65%DateThu Jan 5 12:19:21 GMT 2012
Rank228Aligned Residues73
% Identity16%Templatec2ya0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: catalytic module of the multi-modular glycogen-degrading2 pneumococcal virulence factor spua
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   676...680.........690..... ....700.........710.........720.........
Predicted Secondary structure 



..........................













Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . . . . . . .

































Query Sequence  HDTEIFKRIQILRDMGVGLS. . . . . . . . . . . . . . . . . . . . . . . . . . VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT
Query Conservation             
   
    .......................... 



 
 

   
       



         
Alig confidence 



















..........................








........
















Template Conservation     

  





 



 
 
 

                          



........   
 
    




  
Template Sequence  TFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYD. . . . . . . . PQNYFSLTGMYSSDPKN
Template Known Secondary structure  STTT
SS

B
BSS
BGGGTTS


S

SSS
S


S
S........BS
SSSB
STTSS
TTS
Template Predicted Secondary structure 





































........
















Template SS confidence 















































































   159160.........170.........180.........190.........200.........210... ......220.........230
 
   730.........740.........750......
Predicted Secondary structure 





Query SS confidence 


























Query Sequence  EKRILALLEAITSIGQSLNLTVVAEGV
Query Conservation            
            



Alig confidence 


























Template Conservation 
     


 

  

  

 





Template Sequence  PEKRIAEFKNLINEIHKRGMGAILDVV
Template Known Secondary structure  TTTT

Template Predicted Secondary structure 







Template SS confidence 


























   231........240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions