Job Description P76129 Confidence 98.88% Date Thu Jan 5 12:19:21 GMT 2012 Rank 80 Aligned Residues 149 % Identity 7% Template c2veaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phytochrome-like protein cph1; PDBTitle: the complete sensory module of the cyanobacterial2 phytochrome cph1 in the pr-state. Resolution 2.21 Å

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		22	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		M	M	G	A	V	L	I	.	.	N	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E	L	Q	L	E	K	K	D	G	S
Query Conservation									.	.
Alig confidence									.	.																																																						.
Template Conservation																																																																.
Template Sequence		P	H	G	L	V	V	V	L	Q	E	P	D	L	T	I	S	Q	I	S	A	N	C	T	G	I	L	G	R	S	P	E	D	L	L	G	R	T	L	G	E	V	F	D	S	F	L	T	A	G	Q	I	S	S	L	N	P	S	K	L	W	A	R	.	V	M	D	F	V	I	F	D	G	V	F	H	R	N	S	D	G
Template Known Secondary structure		T	T	S							T	T	T	T							T	T					T	S			T	T	T	S	S	T	T	T	T	T	T	T	S	B						T	T					S	S							.															S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																			.																					.	.	.	.																									.	.	.	.
Query SS confidence																			.																					.	.	.	.																									.	.	.	.
Query Sequence		K	I	W	T	R	F	A	L	S	K	V	S	A	E	G	K	V	.	Y	Y	L	A	L	V	R	D	A	S	V	E	M	A	Q	K	E	Q	T	R	.	.	.	.	Q	L	I	I	A	V	D	H	L	D	R	P	V	I	V	L	D	P	E	R	H	I	V	Q	.	.	.	.	C	N	R	A	F	T	E	M	F	G
Query Conservation																			.																					.	.	.	.																									.	.	.	.
Alig confidence																			.																					.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		L	L	V	C	E	L	E	P	A	Y	T	S	D	N	L	P	F	L	G	F	Y	H	M	A	N	A	A	L	N	R	L	N	L	R	D	F	Y	D	V	I	V	E	E	V	R	R	M	T	G	F	D	R	V	M	L	Y	R	F	D	E	N	N	H	G	D	V	I	A	E	D	K	R	D	D	M	E	P	Y	L	G
Template Known Secondary structure												T	T	S			S	T	T	T	T	T																														S									T	T	S											T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		171
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		201

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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