Job Description P76129 Confidence 46.27% Date Thu Jan 5 12:19:21 GMT 2012 Rank 343 Aligned Residues 156 % Identity 10% Template c2qw5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.			.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.												670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	C	R	Q	L	A	E	W	R	S	Q	N	I	H	I	P	A	L	S	V	N	L	S	A	L	H	F	R	S	N	Q	L	.	.	P	N	Q	V	S	D	A	M	H	A	W	G	I	D	G	H	Q	L	T	V	E	I	T	.	.	.	.	.	.	.	.	.	.	.	E	S	M	M	M	E	H	D	T	E
Query Conservation																																				.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	V	V	A	H	I	K	K	L	Q	R	F	G	Y	S	G	F	E	F	P	I	A	P	G	L	P	E	N	Y	A	Q	D	L	E	N	Y	T	N	L	R	H	Y	L	D	S	E	G	L	E	N	V	K	I	S	T	N	V	G	A	T	R	T	F	D	P	S	S	N	Y	P	E	Q	R	Q	E	A	L	E	Y
Template Known Secondary structure														T	T													G	G	G																		T	T	T	T	T											S	S	S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.		.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure																																																								.																						.	.	.	.
Query SS confidence																																																								.																						.	.	.	.
Query Sequence		I	F	K	R	I	Q	I	L	R	D	M	G	V	G	L	S	V	D	D	F	G	T	G	F	S	G	L	S	R	L	V	S	L	P	V	T	E	I	K	I	D	K	S	F	V	D	R	C	L	T	E	K	R	I	.	L	A	L	L	E	A	I	T	S	I	G	Q	S	L	N	L	T	V	V	A	E	.	.	.	.
Query Conservation																																																								.																						.	.	.	.
Alig confidence																			.	.	.																																			.																						.	.	.	.
Template Conservation																			.	.	.
Template Sequence		L	K	S	R	V	D	I	T	A	A	L	G	G	E	I	X	X	.	.	.	G	P	I	V	I	P	Y	G	V	F	P	T	T	D	F	N	E	P	I	W	S	D	E	L	Q	E	H	L	K	V	R	Y	A	N	A	Q	P	I	L	D	K	L	G	E	Y	A	E	I	K	K	V	K	L	A	I	E	P	I	T	H
Template Known Secondary structure												T	T		S				.	.	.				S	S		T	T				B		T	T			B																															T	T										T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
						755	.	.	.		.	760	.	.	.	.	.	.	.	.	.	770	.
Predicted Secondary structure		.	.	.	.					.
Query SS confidence		.	.	.	.					.
Query Sequence		.	.	.	.	G	V	E	T	.	K	E	Q	F	E	M	L	R	K	I	H	C	R
Query Conservation		.	.	.	.					.
Alig confidence		.	.	.	.					.
Template Conservation
Template Sequence		W	E	T	P	G	P	N	K	L	S	Q	L	I	E	F	L	K	G	V	K	S	K
Template Known Secondary structure		T	T		S	S			S										T				T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions