Job Description P76129 Confidence 99.71% Date Thu Jan 5 12:19:21 GMT 2012 Rank 31 Aligned Residues 124 % Identity 22% Template c2pr6A_ PDB info PDB header:flavoprotein, signaling protein Chain: A: PDB Molecule:blue-light photoreceptor; PDBTitle: structural basis for light-dependent signaling in the dimeric lov2 photosensor ytva (light structure) Resolution 1.95 Å

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		18	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		L	E	Q	N	M	M	G	A	V	L	I	N	.	.	.	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E	L	Q	L	E
Query Conservation														.	.	.
Alig confidence														.	.	.																																																						.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		L	D	H	V	R	V	G	V	V	I	T	D	P	A	L	E	D	N	P	I	V	Y	V	N	Q	G	F	V	Q	M	T	G	Y	E	T	E	E	I	L	G	K	N	C	R	F	L	Q	G	K	H	T	D	P	A	E	V	D	N	I	R	T	A	L	Q	N	K	E	P	.	.	.	.	V	T	V	Q	I	Q	N	Y
Template Known Secondary structure														T	T	S	T	T															S			G	G	G	T	T	T	S		G	G	G	G			T	T															T	T			.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	D	G	S	K	I	W	T	R	F	A	L	S	K	V	S	A	E	G	K	V	Y	Y	L	A	L	V	R	D	A	S	V	E	M	A	Q	K	E	Q	T	R	Q	L	I	I	A	V	D	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	D	G	T	M	F	W	N	E	L	N	I	D	P	M	E	I	E	D	K	T	Y	F	V	G	I	Q	N	D	I	T	K	Q	K	E	Y	E	K	L	L	E	D	S	L	T	E	I	T	A	L
Template Known Secondary structure			T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions