Job Description P76129 Confidence 98.86% Date Thu Jan 5 12:19:21 GMT 2012 Rank 81 Aligned Residues 110 % Identity 11% Template c2oolA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris Resolution 2.20 Å

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		22	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		M	M	G	A	V	L	I	.	.	N	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E	L	Q	L	E	K	K	D	G	S
Query Conservation									.	.
Alig confidence									.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		P	H	G	Y	L	F	V	V	S	E	T	D	L	R	I	A	S	V	S	A	N	V	E	D	L	L	R	Q	P	P	A	S	L	L	N	V	P	I	A	H	Y	L	T	A	A	S	A	A	R	L	T	H	A	L	.	.	.	.	.	.	.	.	.	H	G	A	I	N	P	I	R	L	D	V	V	T	P	D	G	E
Template Known Secondary structure		T	T	S							T	T	T		B						T	T						S	S		G	G	G	G	T	T		B	G	G	G	G	B													.	.	.	.	.	.	.	.	.						S								T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	W	T	R	F	A	L	S	K	V	S	A	E	G	K	V	Y	Y	L	A	L	V	R	D	A	S	V	E	M	A	Q	K	E	Q	T	R	Q	L	I	I	A	V	D	H	L
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		R	A	F	N	G	I	L	H	R	H	D	S	.	.	.	.	.	I	V	I	L	E	L	E	P	R	D	E	S	R	Y	T	N	E	F	F	R	S	V	R	V	A	I	R	R	L
Template Known Secondary structure												T	T	.	.	.	.	.													S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions