Job Description P76129 Confidence 20.75% Date Thu Jan 5 12:19:21 GMT 2012 Rank 486 Aligned Residues 62 % Identity 18% Template c2oh2B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna polymerase kappa; PDBTitle: ternary complex of human dna polymerase Resolution 3.05 Å

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		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.																						460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	L	L	E	V	V	N	R	F	R	E	K	L	K	P	D	Q	Y	L	C	R	I	E	G	T	Q	F	V	L	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	N	D	V	S	N	I	T	Q	I	A	D	E	L	R	N	V	V	S	K	P	I	M	I	D	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation															.	.	.																																																											.	.	.	.	.	.
Template Sequence		A	V	S	K	E	V	K	E	I	L	A	D	Y	.	.	.	D	P	N	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	.	.	.	.	.	.
Template Known Secondary structure															.	.	.		T	T			B		S	S	S						T								T	S			T	T	T	S	B								B			S	S															.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.																																																											.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	P	L	T	L	S	I	G	I	S	Y
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	T	T	L	T	A	S	A	G	I	A	P
Template Known Secondary structure		.			S									S
Template Predicted Secondary structure		.
Template SS confidence
			304	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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