Job Description P76129 Confidence 98.96% Date Thu Jan 5 12:19:21 GMT 2012 Rank 78 Aligned Residues 135 % Identity 10% Template c2o9bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of bacteriophytochrome chromophore binding domain Resolution 2.15 Å

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		20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Q	N	M	M	G	A	V	L	I	N	.	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E	L	Q	L	E	K	K	D	G
Query Conservation												.
Alig confidence												.																																											.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		Q	P	H	G	A	L	L	T	A	D	G	H	S	G	E	V	L	Q	M	S	L	N	A	A	T	F	L	G	Q	E	P	T	V	L	R	G	Q	T	L	A	A	L	L	P	E	Q	W	P	A	L	Q	A	A	.	.	.	.	.	.	.	L	P	P	G	C	P	D	A	L	Q	Y	R	A	T	L	D	W	P	A	A
Template Known Secondary structure			T	T	S							T	T	T		B						T	T						S	S						T	T		B					S	T	T	T								.	.	.	.	.	.	.	S		T	T			T	T										S	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																											.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		S	K	I	W	T	R	F	A	L	S	K	V	S	A	E	G	K	V	Y	Y	L	A	L	V	R	.	.	.	.	D	A	S	V	E	M	A	Q	.	.	.	.	.	.	.	.	K	E	Q	T	R	Q	L	I	I	A	V	D	H	L	D	R	P	V	I	V	L	D	P	E	R	H	I	V	Q	C
Query Conservation																											.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	L	S	L	T	V	H	R	V	G	E	L	L	I	L	E	F	E	P	T	E	T	G	P	H	A	L	R	N	A	M	F	A	L	E	S	A	P	N	L	R	A	L	A	E	V	A	T	Q	T	V	R	E	L	T	G	F	D	R	V	M	L	Y	K	F	A	P	D	A	T	G	E	V	I
Template Known Secondary structure		S										T	T																												S																			S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions