Job Description P76129 Confidence 30.44% Date Thu Jan 5 12:19:21 GMT 2012 Rank 419 Aligned Residues 168 % Identity 13% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.					.	.	.	.	.	.	.	600	.	.	.	.							.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure																				.	.	.	.													.	.	.	.	.	.
Query SS confidence																				.	.	.	.													.	.	.	.	.	.
Query Sequence		I	E	A	L	A	R	W	H	D	P	L	H	G	H	V	P	P	S	.	.	.	.	R	F	I	P	L	A	E	E	I	G	E	I	.	.	.	.	.	.	E	N	I	G	R	W	V	I	A	E	A	C	R	Q	L	A	E	W	R	S	Q	N	I	H	I	P	A	L	S	V	N	L	S	A	L	H	F	R	S	N
Query Conservation																				.	.	.	.													.	.	.	.	.	.
Alig confidence																				.	.	.	.													.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F	V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	.	.	.	.	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	L
Template Known Secondary structure								G	G	G	T	T	S	S	S																		T									T	T																	.	.	.	.	T													T	T
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690		.	.	.	.	.	.				.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure																																																.							.	.	.
Query SS confidence																																																.							.	.	.
Query Sequence		Q	L	P	N	Q	V	S	D	A	M	H	A	W	G	I	D	G	H	Q	L	T	V	E	I	T	E	S	M	M	M	E	H	D	T	E	I	F	K	R	I	Q	I	L	R	D	M	.	G	V	G	L	S	V	.	.	.	D	D	F	G	T	G	F	S	G	L	S	R	L	V	S	L	P	V	T	E	I	K	I	D
Query Conservation																																																.							.	.	.
Alig confidence																		.	.	.	.																											.							.	.	.
Template Conservation																		.	.	.	.
Template Sequence		Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	.	.	.	.	S	I	A	L	K	D	M	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A
Template Known Secondary structure														T	T		S	.	.	.	.							S	S	S																		S		S									T	T	S												T	T		S					B
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	F	V	D	R	C	L	T	E	K	R	I	L	A	L	L	E	A	I	T	S	I	G	Q	S	L	N	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	S	M	S	G	T	Y	G	H	P	A	T	E	S	L	V	A	T	L	Q	G	T	G	Y	D	T	G	L	D
Template Known Secondary structure			G	G	G		S	T	T	S			B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions