 |
Job Description | P76129 | Confidence | 54.56% | Date | Thu Jan 5 12:19:21 GMT 2012 |
Rank | 306 | Aligned Residues | 147 |
% Identity | 12% | Template | c2htmB_ |
PDB info |
PDB header:biosynthetic protein | Chain: B: PDB Molecule:thiazole biosynthesis protein thig; |
PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8
|
Resolution | 2.30 Å |
|
 |
  |   |
644 | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Q | L | P | N | Q | V | S | D | A | M | H | A | W | G | I | D | G | H | Q | L | T | V | E | I | T | E | S | M | M | M | E | H | D | T | E | I | F | K | R | I | Q | I | L | R | D | M | G | V | G | L | S | V | D | D | F | G | T | G | F | S | G | L | S | R | L | V | S | L | P | V | T | E | I | K | I | D | K | S | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
| . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |   |
Template Sequence |   |
E | E | A | V | R | L | A | R | L | G | R | L | L | T | G | E | R | W | V | K | L | E | V | I | P | D | P | T | Y | L | L | P | D | P | L | E | T | L | K | A | A | E | R | L | I | E | E | D | F | L | V | . |
L | P | Y | M | G | P | D | L | V | L | A | K | R | L | A | A | L | G | T | A | T | V | M | P | L | A | A | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
|
|
| S |
| T | T | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  | . |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | T |
| S |
| B |  |  | B | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
724 | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | |
. | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | |
. | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | R | C | L | T | E | K | R | I | L | A | L | L | E | A | I | T | S | I | G | Q | S | L | N | L | T | V | V | A | E | G | . |
V | E | T | K | E | Q | F | E | M | L | R | K | I | H | C | R | V | I | Q | . |
G | Y | F | F | S | R | P | L | P | A | E | E | I | P | G | W | M | S | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
| . |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
| . |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | G | S | . |
G | W | G | V | R | T | R | A | L | L | E | L | F | A | . |
R | E | K | A | S | L | P | P | V | V | V | D | A | G | L | G | L | P | S | H | A | A | E | V | M | E | L | G | L | D | A | V | L | V | N | T | A | I | A | E | A | Q | D | P | P | A | M | A | E | A | F | R | L |
Template Known Secondary structure |   |
T | T | S | . |
|
|
| S | S | S |  |  |  |  |  |  |  |  | . |  | T | G | G | G | S | S |
| B |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S |  |  |  |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|