Job Description P76129 Confidence 99.65% Date Thu Jan 5 12:19:21 GMT 2012 Rank 44 Aligned Residues 113 % Identity 23% Template c2gj3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:nitrogen fixation regulatory protein; PDBTitle: crystal structure of the fad-containing pas domain of the2 protein nifl from azotobacter vinelandii. Resolution 1.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	F	F	P	A	L	E	Q	N	M	M	G	A	V	L	I	N	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E
Query Conservation
Alig confidence																																																																										.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		P	E	I	F	R	Q	T	V	E	H	A	P	I	A	I	S	I	T	D	L	K	A	N	I	L	Y	A	N	R	A	F	R	T	I	T	G	Y	G	S	E	E	V	L	G	K	N	E	S	I	L	S	N	G	T	T	P	R	L	V	Y	Q	A	L	W	G	R	L	A	Q	K	K	P	.	.	.	.	W	S	G	V
Template Known Secondary structure													S	S							T	T		B																T	T	G	G	G	G		B	G	G	G	G			T	T	S														T	T			.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		L	Q	L	E	K	K	D	G	S	K	I	W	T	R	F	A	L	S	K	V	S	A	E	G	K	.	.	V	Y	Y	L	A	L	V	R	D	A	S	V
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		L	V	N	R	R	K	D	K	T	L	Y	L	A	E	L	T	V	A	P	V	L	N	E	A	G	E	T	I	Y	Y	L	G	M	H	R	D	T	S	E
Template Known Secondary structure							T	T	S															T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions