Job Description P76129 Confidence 29.36% Date Thu Jan 5 12:19:21 GMT 2012 Rank 429 Aligned Residues 131 % Identity 15% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.							640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		W	V	I	A	E	A	C	R	Q	L	A	E	W	R	S	Q	N	I	H	I	P	A	L	S	V	N	L	S	A	L	.	.	.	.	.	.	H	F	R	S	N	Q	L	P	N	Q	V	S	D	A	M	H	A	W	G	I	D	G	H	Q	L	T	V	E	I	T	E	S	M	M	M	E	H	D	T	E	I	F	K	R
Query Conservation																																.	.	.	.	.	.
Alig confidence																					.	.	.									.	.	.	.	.	.																						.	.	.	.
Template Conservation																					.	.	.																																				.	.	.	.
Template Sequence		E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	.	.	.	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T	K	K	F	Y	S	M	G	C	Y	.	.	.	.	E	I	S	L	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M
Template Known Secondary structure		T															T	T			.	.	.							S	T	T		B	T	T	T	B	S																T	T		S	.	.	.	.							T	T
Template Predicted Secondary structure																					.	.	.																																				.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		684	.	.	.	.	.	690			.	.	.	.	.	.				.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.										.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.							.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence									.	.							.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	I	L	R	D	M	.	.	G	V	G	L	S	V	.	.	.	D	D	F	G	T	G	F	S	G	L	S	R	L	V	S	L	P	V	T	E	I	K	I	D	K	S	F	V	D	R	C	.	.	.	.	.	.	.	.	.	L	T	E	K	R	I	L	A	L	L	E	A	I	T	S	I	G	Q	S	L	N	L
Query Conservation									.	.							.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence									.	.							.	.	.																					.	.					.					.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.					.
Template Sequence		L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	V	S	V	.	.	V	D	S	S	.	V	A	G	L	G	G	C	P	Y	A	Q	G	A	S	G	N	L	A	T	E	D	L	V	Y	M	L	E	G	L	G	I	H	T	G	V
Template Known Secondary structure									S		G	G	G						B		T	T	S												T	T				.	.				B	.	T	T	S					T	T	S	S	S				B		B											T	T		B
Template Predicted Secondary structure																																								.	.					.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		750
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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