Job Description P76129 Confidence 36.07% Date Thu Jan 5 12:19:21 GMT 2012 Rank 392 Aligned Residues 107 % Identity 16% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	D	T	E	I	F	K	R	I	Q	I	L	R	D	M	G	V	G	L	S	V	D	D	F	G	T	G	F	S	G	L	S	R	L	V	S	L	P	V	T	E	I	K	I	D	K	S	F	V	D	R	C	L	T	E	K	R	I	L	A	L	L	E	A	I	T	S	I	G	Q	S	L	N	L	T	V	V	A	E
Query Conservation
Alig confidence																								.	.																								.	.	.	.				.																					.
Template Conservation																								.	.																								.	.	.	.				.																					.
Template Sequence		D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	S	.	.	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	.	.	.	.	L	L	P	.	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T	E	V	.	I	V	I	T
Template Known Secondary structure																		T						.	.		S	S											S			S						S	.	.	.	.	B		S	.	S	S	B													T	T	S			.
Template Predicted Secondary structure																								.	.																								.	.	.	.				.																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	K	E	Q	F	E	M	L	R	K	I	H	C	R	V	I	Q	G	Y	F	F	S	R	P	L	P	A	E	E	I	P	G	W	M	S	S
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		G	H	G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	.	.	.	.	L	T	K	P	C	M	L	E	E	I	E	L	T	I	N	K
Template Known Secondary structure			T	T										T	T	T					.	.	.	.				S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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