Job Description P63340 Confidence 98.75% Date Thu Jan 5 12:08:05 GMT 2012 Rank 6 Aligned Residues 376 % Identity 12% Template d2a65a1 SCOP info SNF-like SNF-like SNF-like Resolution 1.65

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																								.																																			.
Query SS confidence																								.																																			.
Query Sequence		N	I	W	S	K	E	E	T	L	W	S	F	A	L	Y	G	T	A	V	G	A	G	.	T	L	F	L	P	I	Q	L	G	S	A	G	A	V	V	L	F	I	T	A	L	V	A	W	P	L	T	Y	W	P	H	K	A	L	.	C	Q	F	I	L	S	S	K	T	S	A	G	E	G	I	T	G	A	V	T	H	Y
Query Conservation																								.																																			.
Alig confidence								.																.																																			.
Template Conservation								.
Template Sequence		E	H	W	A	T	R	.	L	G	L	I	L	A	M	A	G	N	A	V	G	L	G	N	F	L	R	F	P	V	Q	A	A	E	N	G	G	G	A	F	M	I	P	Y	I	I	A	F	L	L	V	G	I	P	L	M	W	I	E	W	A	M	G	R	Y	G	G	A	Q	G	H	G	T	T	P	A	I	F	Y	L	L
Template Known Secondary structure					S			.												S	S					T									T	T	T														T																	T	T	T			S
Template Predicted Secondary structure								.
Template SS confidence
		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	K	K	I	G	N	L	I	T	T	L	Y	F	I	A	F	F	V	V	V	L	I	Y	A	V	A	I	T	N	S	L	T	E	Q	L	A	K	H	M	V	I	D	L	R	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	R	N	R	F	A	K	I	L	G	V	F	G	L	W	I	P	L	V	V	A	I	Y	Y	V	Y	I	E	S	W	T	L	G	F	A	I	K	F	L	V	G	L	V	P	E	P	P	P	T	D	P	D	S	I	L	R	P	F	K	E	F	L	Y	S	Y	I	G	V	P	K	G	D	E	P	I	L	K	P	S	L
Template Known Secondary structure		S		S								T																														T																										T			S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
					128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																					.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																					.	.	.	.	.	.	.	.
Query Sequence		.	.	.	M	L	V	S	L	G	V	V	L	I	L	N	L	I	F	L	M	G	R	H	A	T	I	R	V	M	G	F	L	V	F	P	L	I	A	Y	F	L	F	L	S	I	Y	L	V	G	S	W	Q	P	D	L	.	.	.	.	.	.	.	.	L	T	T	Q	V	E	F	N	Q	N	T	L	H	Q	I	W	I
Query Conservation		.	.	.																																																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Y	I	V	F	L	I	T	M	F	I	N	V	S	I	L	I	R	G	I	S	K	G	I	E	R	F	A	K	I	A	M	P	T	L	F	I	L	A	V	F	L	V	I	R	V	F	L	L	E	T	P	N	G	T	A	A	D	G	L	N	F	L	W	T	P	D	F	E	K	L	K	D	P	G	V	W	I	A
Template Known Secondary structure																			T	T		T	T	T	T																								T	T				T	T												S			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		S	I	P	V	M	V	F	A	F	S	H	T	P	I	I	S	T	F	A	I	D	R	R	E	K	Y	G	E	H	A	M	D	K	C	K	K	I	M	K	V	A	Y	L	I	I	C	I	S	V	L	F	F	V	F	S	C	L	L	S	I	P	P	S	Y	I	E	A	A	K	E	E	G	V	T	.	.	.	.	.	I
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.
Template Conservation
Template Sequence		A	V	G	Q	I	F	F	T	L	S	L	G	F	G	A	I	I	T	Y	A	S	Y	V	R	K	D	Q	D	I	V	L	S	G	L	T	A	A	T	L	N	E	K	A	E	V	I	L	G	G	S	I	S	I	P	A	A	V	A	F	F	G	V	A	N	A	V	A	I	A	K	A	G	A	F	N	L	G	F	I	T
Template Known Secondary structure											T	T	T	S	S							T	T	S		T	T	S																			T	T																										S	S					T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	L	S	M	L	P	N	A	P	A	W	L	S	I	S	G	I	I	V	A	V	V	A	M	S	K	S	F	L	G	T	Y	F	G	V	I	E	G	A	T	E	V	V	K	T	T	L	Q	Q	V	G	V	K	K	S	R	A	F	N	R	A	L	S	I	M	L	V	S	L	I	T	F	I	V	C	C	I	N
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	A	I	F	S	Q	T	A	G	G	T	F	L	G	F	L	W	F	F	L	L	F	F	A	G	L	T	S	S	I	A	I	M	Q	P	M	I	A	F	L	E	D	E	L	K	.	.	.	.	.	.	.	.	.	.	L	S	R	K	H	A	V	L	W	T	A	A	I	V	F	F	S	A	H	L	V	M	F	L
Template Known Secondary structure							T	T	S	T	T																																		T	S		.	.	.	.	.	.	.	.	.	.																								B
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.											.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	A	I	S	M	I	Y	A	I	S	G	P	L	I	A	M	I	L	F	I	M	P	T	L	S	T	Y	L	I	P	A	L	K	P	W	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	S	L	D	E	M	D	F	W	A	G	T	I	G	V	V	F	F	G	L	T	E	L	I	I	F	F	W	I	F	G	A	D	K	A	W	E
Template Known Secondary structure		T	T									T	T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.