Job Description P0ACL5 Confidence 88.41% Date Thu Jan 5 11:18:27 GMT 2012 Rank 201 Aligned Residues 67 % Identity 24% Template d1t6sa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like Resolution 1.95

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																											.	.																	.	.	.	.	.	.
Query SS confidence																																											.	.																	.	.	.	.	.	.
Query Sequence		M	K	D	E	R	R	P	I	C	E	V	V	A	E	S	I	E	R	L	I	I	D	G	V	L	K	V	G	Q	P	L	P	S	E	R	R	L	C	E	K	L	.	.	G	F	S	R	S	A	L	R	E	G	L	T	V	L	R	G	.	.	.	.	.	.	R	G	I	I	E	T	A	Q	G	R	D	S	R	V	A
Query Conservation																																											.	.																	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.								.										.	.																	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.								.
Template Sequence		M	Q	E	Q	R	Q	Q	L	L	R	S	L	E	A	L	I	.	.	.	.	.	.	.	.	F	S	S	E	E	P	V	.	N	L	Q	T	L	S	Q	I	T	A	H	K	F	T	P	S	E	L	Q	E	A	V	D	E	L	N	R	D	Y	E	A	T	G	R	T	F	R	I	H	A	I	A	G	G	Y	R	F	L
Template Known Secondary structure																		.	.	.	.	.	.	.	.				S	S		B	.									T	T																							T		S							T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		73	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	P	E
Template Known Secondary structure				G	G
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions