Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACL5
Confidence93.05%DateThu Jan 5 11:18:27 GMT 2012
Rank166Aligned Residues94
% Identity11%Templated1sd4a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40. ........50.........60.........70.........80.........90.........100........
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Query Sequence  SERRLCEKL. . . . GFSRSALREGLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGES
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Template Sequence  SANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYKSENIYFYSSNIK. . . . . EDDIKXKTAKTFLNKLYGGDXKSLVL
Template Known Secondary structure  TTS


TTSTT
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   26...30.........40.........50.........60.........70.... .....80.........90.........100
 
   109110.........120.........130.
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Query Sequence  ARLAATLGTQADFVVITRCYEKM
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Template Sequence  NFAKNEELNNKEIEELRDILNDI
Template Known Secondary structure  TT
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   101........110.........120...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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