Job Description P0ACL5 Confidence 93.04% Date Thu Jan 5 11:18:27 GMT 2012 Rank 167 Aligned Residues 92 % Identity 10% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		33	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		S	E	R	R	L	C	E	K	L	.	.	.	.	G	F	S	R	S	A	L	R	E	G	L	T	V	L	R	G	R	G	I	I	E	T	A	Q	G	R	D	S	R	V	A	R	L	N	R	V	Q	D	T	S	P	L	I	H	L	F	S	T	Q	P	R	T	L	Y	D	L	L	D	V	R	A	L	L	E	G	E	S
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																																																											.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	.	.	.	.	.	S	L	V	L
Template Known Secondary structure																																T	S							T	T							S	S																		S	T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	A	A	T	L	G	T	Q	A	D	F	V	V	I	T	R	C	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N
Template Known Secondary structure							S															T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions