Job Description P0ACL5 Confidence 100.00% Date Thu Jan 5 11:18:27 GMT 2012 Rank 4 Aligned Residues 202 % Identity 22% Template c3ihuA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of dna binding protein (yp_298823.1) from ralstonia2 eutropha jmp134 at 1.92 a resolution Resolution 1.92 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	C	E	V	V	A	E	S	I	E	R	L	I	I	D	G	V	L	K	V	G	Q	P	L	P	S	E	R	R	L	C	E	K	L	G	F	S	R	S	A	L	R	E	G	L	T	V	L	R	G	R	G	I	I	E	T	A	Q	G	R	D	S	R	V	A	R	L	N	R	V	Q	D	T	S	P	L	I	H	L
Query Conservation
Alig confidence																												.																																																		.	.	.	.
Template Conservation																												.																																																		.	.	.	.
Template Sequence		S	A	S	D	T	V	F	F	G	I	X	S	G	L	E	L	G	T	F	V	P	G	Q	R	L	V	.	E	T	D	L	V	A	H	F	G	V	G	R	N	S	V	R	E	A	L	Q	R	L	A	A	E	G	I	V	D	L	Q	R	H	R	G	A	V	I	R	R	L	S	L	Q	E	T	L	D	V	.	.	.	.
Template Known Secondary structure																		T	S	S		T	T					.									T																T	T	S					S	T	T																.	.	.	.
Template Predicted Secondary structure																												.																																																		.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	S	T	Q	P	R	T	L	Y	D	L	L	D	V	R	A	L	L	E	G	E	S	A	R	L	A	A	T	.	L	G	T	Q	A	D	F	V	V	I	T	R	C	Y	E	K	M	L	A	A	S	E	N	N	K	E	I	S	L	I	E	H	A	Q	L	D	H	A	F	H	L	A	I	C	Q	A	S	H	N	Q	V
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	D	V	A	E	R	X	T	G	L	L	A	R	A	A	T	R	G	S	G	N	Q	P	Q	V	Q	A	L	R	A	S	V	Q	A	L	V	A	A	E	K	A	.	.	.	Q	D	G	E	T	F	S	N	A	R	R	H	F	Y	R	T	L	L	E	X	G	D	N	R	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																G	G	G	T	T																					T	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	F	T	L	Q	S	L	T	D	L	M	F	N	S	V	F	A	S	V	N	N	L	Y	H	R	P	Q	Q	K	K	Q	I	D	R	Q	H	A	R	I	Y	N	A	V	L	Q	R	L	P	H	V	A	Q	R	A	A	R	D	H	V	R	T	V	K	K	N	L	H	D
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		L	R	R	L	F	P	T	I	H	X	P	I	V	H	A	Q	.	.	.	.	.	.	.	H	R	L	A	S	L	R	Q	X	R	L	D	D	Y	R	R	I	A	T	A	V	L	A	G	E	P	D	A	A	E	A	A	G	A	A	H	V	K	N	V	R	G	A	I	L	D
Template Known Secondary structure																		.	.	.	.	.	.	.	T	T	G	G	G	G																		T
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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