Return to main results Retrieve Phyre Job Id

Job DescriptionP05459
Confidence99.64%DateThu Jan 5 10:58:44 GMT 2012
Rank67Aligned Residues114
% Identity13%Templated2dlda2
SCOP infoFlavodoxin-like Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenases, substrate-binding domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10......... 20........ .30.........40.........50..... .... 60.........70
Predicted Secondary structure 



......





..














.



..





Query SS confidence 

















. . . . . .








. .


























.



. .










Query Sequence  KILVDENMPYARDLFSRL. . . . . . GEVTAVPGR. . PIPVAQLADADALMVRSVTKVNESLLA. GKPI. . KFVGTATAGTD
Query Conservation 


 

 

   
     ...... 

      ..    
 
 








 
 
   

 .   
..
 
     
 
Alig confidence 

















......








..


























.



..










Template Conservation 


       
    
         

         
        
 

         


     
 

 
     
 
Template Sequence  KVFAYAIRKDEEPFLNEWKEAHKDIDVDYTDKLLTPETAKLAKGADGVVVYQQLDYTADTLQALADAGVTKMSLRNVGVD
Template Known Secondary structure  S

TTT
TT


SS


TTGGGGSTT
S

SS
B



SSS

T
Template Predicted Secondary structure 































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   71........80.........90.........100.........110.......
Predicted Secondary structure 


















Query SS confidence 














































Query Sequence  HVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLYDR
Query Conservation   

       

 
 



 

 



 

  

 
 
     
 

Alig confidence 

























..


















Template Conservation   

  

   

 


 

      
..
  
 
   
       
 
Template Sequence  NIDMDKAKELGFQITNVPVYSYTTHA. . VRNMVVKAFNNNLKLINGE
Template Known Secondary structure  TB
TT
B
B







..T
Template Predicted Secondary structure 










..


Template SS confidence 














































   83......90.........100........ .110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions