|   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | V | G | I | V | G | V | G | N | V | G | R | R | L | Q | A | R | L | E | A | L | G | I | K | T | L | L | C | D | P | P | R | A | D | R | G | . |
. |
. |
. |
. |
. |
D | E | G | D | F | R | S | L | D | E | L | V | Q | R | A | D | I | L | T | F | H | T | P | L | F | K | D | G | P | Y | K | T | L | H | L | A | D |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
Template Sequence |   |
X | K | I | G | I | I | G | V | G | K | X | A | S | A | I | I | K | G | L | K | Q | T | P | H | E | L | I | I | S | G | S | S | L | E | R | S | K | E | I | A | E | Q | L | A | L | P | Y | A | X | S | H | Q | D | L | I | D | Q | V | D | L | V | I | L | G | I | K | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | F |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| B |
| S | S |  |  |  |  |  |  | T |
| S |  |  |  |  |
| S |
| G | G | . | . | . | . | . | . | . | . | . | . | G |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 70 |
  |
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | I | R | S | L | K | P | G | A | I | L | I | N | A | C | R | G | A | V | V | D | N | T | A | L | L | T | C | L | N | E | G | . |
Q | K | L | S | V | V | L | D | V | W | E | G | E | P | E | L | N | V | E | L | L | K | K | V | D | I | G | T | S | H | I | A | G | Y | T | L | E | G | K | A | R | G | T | T | Q |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |
| . |   |
|   |   |
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
E | T | V | L | K | P | L | H | F | K | Q | P | I | I | S | X | A | . |
. |
A | G | I | S | L | Q | R | L | A | T | F | V | G | Q | D | L | P | L | L | R | I | . |
. |
. |
. |
. |
. |
. |
X | P | N | X | N | A | Q | I | L | Q | S | S | T | A | L | T | G | N | . |
A | L | V | S | Q | E | L | Q | A | R | V | R | D | L |
Template Known Secondary structure |   |
 |  |  |  | T | T | S |
|
|
| S |
|  |  |  |
|
| . | . | T | T |
|
|  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  | . | . | . | . | . | . | . |  |
|
| G | G | G | G | G | T |
|  |  |  |  |  |  |  |
| . | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
  |   |
270 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
V |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
T |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
141 |
  |