Return to main results Retrieve Phyre Job Id

Job DescriptionP05459
Confidence99.94%DateThu Jan 5 10:58:44 GMT 2012
Rank45Aligned Residues139
% Identity19%Templated1v8ba1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150... ......160......
Predicted Secondary structure 






















....



Query SS confidence 






























































. . . .












Query Sequence  NAIAVVEYVFSSLLMLAERDGFSLYDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRG. . . . DEGDFRSLDELVQ
Query Conservation 

 



 

  

 
 
     
 







 
 

  

  
 


  
   

      ....       
 


 
Alig confidence 













...













































....












Template Conservation                ...
  
  
 



 


 
 

  

  
   
  
   
                  
     
Template Sequence  NVYGCRHSLPDGLM. . . RATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVD
Template Known Secondary structure 

...



TTS

ST

S
TTT


TT
Template Predicted Secondary structure 




...






















Template SS confidence 















































































   235....240........ .250.........260.........270.........280.........290.........300.........310.
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  RADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLK
Query Conservation   






 


  
   
  


   
  

 





 


 



 

  

  
 
  
 


 
 

     

 
Alig confidence 









........























...













....
















Template Conservation   



     ........   

       

 








... 
 


  

  
 .... 


   

      
 
Template Sequence  KGDFFITCTG. . . . . . . . NVDVIKLEHLLKMKNNAVVGNIGH. . . FDDEIQVNELFNYK. . . . GIHIENVKPQVDRITLP
Template Known Secondary structure  T
S

S........SSSSB
TT

TT

SS...TTTSB
TST....T
TT
T
Template Predicted Secondary structure 


........











...




....











Template SS confidence 















































































   312.......320. ........330.........340..... ....350......... 360.........370......
 
   247
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  N
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   377
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions