Job Description P05459 Confidence 97.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 271 Aligned Residues 110 % Identity 23% Template c3vh3A_ PDB info PDB header:metal binding protein/protein transport Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of atg7ctd-atg8 complex Resolution 2.00 Å

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		92	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.											.																												.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.											.																												.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	V	V	E	Y	V	F	S	S	L	.	L	M	L	A	E	R	D	G	F	S	.	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	K	T	L	L	C	D	P	P	R	A	D	R	G	D	E	G	D	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.											.																												.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.											.																												.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	Q	S	V	D	L	N	L	K	L	M	K	W	R	I	L	P	D	L	N	L	D	I	I	K	N	T	K	V	L	L	L	G	A	G	T	L	G	C	Y	V	S	R	A	L	I	A	W	G	V	R	K	I	T	F	V	D	N	G	T	V	S	Y	S	N	P	V	R	Q	A	L	Y	N	F	E	D	C	G	K
Template Known Secondary structure																	T		T	T								T									S													T	T											B			T	T	S	T	T	T	S	T	T			G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
																																												158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.					.	.	.	.
Template Conservation																																																														.					.	.	.	.
Template Sequence		P	K	A	E	L	A	A	A	S	L	K	R	I	F	P	L	M	D	A	T	G	V	K	L	S	I	P	M	I	G	H	K	L	V	N	E	E	A	Q	H	K	D	F	D	R	L	R	A	L	I	K	E	H	D	I	I	F	L	L	V	.	D	S	R	E	.	.	.	.	S	R	W	L	P	S	L	L	S	N	I
Template Known Secondary structure		B														T	T													T	T	S			S																				S							.	S	S	T	G	.	.	.	.	G	G
Template Predicted Secondary structure																																																														.					.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.					.	.	.	.	.	.	.	.	450	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	P	G	A	I	L	I	N	A	C	R	G
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		E	N	K	T	.	.	.	V	I	N	A	A	L	G
Template Known Secondary structure		T	T			.	.	.
Template Predicted Secondary structure						.	.	.
Template SS confidence
		453	.	.	.				.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions