Job Description P05459 Confidence 97.89% Date Thu Jan 5 10:58:44 GMT 2012 Rank 169 Aligned Residues 141 % Identity 18% Template c3updA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus Resolution 2.91 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																								.												.	.
Query SS confidence																																								.												.	.
Query Sequence		A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	.	S	L	Y	D	R	T	V	G	I	V	G	.	.	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D
Query Conservation																																								.												.	.
Alig confidence																									.	.														.												.	.
Template Conservation																									.	.
Template Sequence		E	L	G	A	F	A	G	V	P	V	W	N	G	L	T	D	E	F	H	P	T	Q	I	.	.	L	A	D	F	L	T	M	L	E	H	S	Q	G	K	A	L	A	D	I	Q	F	A	Y	L	G	D	A	R	N	N	V	G	N	S	L	M	V	G	A	A	K	M	G	M	D	I	R	L	V	G	P	Q	A	Y	W
Template Known Secondary structure							S	S	S								S	S							.	.										T	S	S	S			G	G	G							S			S	S													T	T							S		G	G	G	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		152	.	.	.	.																	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.										.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.										.
Query Sequence		R	G	D	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	.	.	.	.	.	.	.	.	.	L	A	D	E	K	L	I	R	S	.	L	K	P	G	A	I	L	I	N
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.										.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		P	D	E	E	L	V	A	A	C	Q	A	I	A	K	Q	T	G	G	K	I	T	L	T	E	N	V	A	E	G	V	Q	G	C	D	F	L	Y	T	D	V	W	V	S	M	G	E	S	P	E	A	W	D	E	R	V	A	L	M	K	P	Y	Q	V	N	M	N	V	L	K	Q	T	G	N	P	N	V	K	F	M	H
Template Known Secondary structure																		T							S							T	T		S								S		S	S	S													G	G	G		B							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		206	.																					.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	A	V	V	D	N	T	A	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	L	P	A	F	H	N	D	E	T	T	I	G	K	Q	V	A	D	K	F	G	M	K	G	L	E	V	T	E	E	V	F
Template Known Secondary structure			S					S	S	S	S													S		S	S	B
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions