Job Description P05459 Confidence 97.31% Date Thu Jan 5 10:58:44 GMT 2012 Rank 232 Aligned Residues 100 % Identity 20% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.														.	.	.	.	.	.
Query SS confidence																											.														.	.	.	.	.	.
Query Sequence		D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L
Query Conservation																											.														.	.	.	.	.	.
Alig confidence																											.														.	.	.	.	.	.																																.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		K	E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	.	.	.	P
Template Known Secondary structure			S	S							S													T	T									S							T			S	S						G	G	G							T		S						S	S	T	T	T	T	S				.	.	.	S
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G
Query Conservation
Alig confidence								.	.	.														.	.	.
Template Conservation								.	.	.														.	.	.
Template Sequence		V	S	D	D	S	L	.	.	.	K	N	L	S	L	V	Y	D	V	I	Y	F	D	.	.	.	T	P	L	V	V	K	A	R	K	L	G
Template Known Secondary structure								.	.	.	T	T		S						S	S	S		.	.	.											T
Template Predicted Secondary structure								.	.	.														.	.	.
Template SS confidence
		185	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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