Job Description P05459 Confidence 97.85% Date Thu Jan 5 10:58:44 GMT 2012 Rank 174 Aligned Residues 103 % Identity 18% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.																.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	I	L	T	F	H	T	P
Query Conservation																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	T	T	P	E	A	S	D	V	F	I	I	A	V	P
Template Known Secondary structure									S	T	T											T	T								S										T	T			S	S			T	T											T	T	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190											.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	K	D	G	P	Y	K	T	L	H	L	A	D	.	.	.	.	.	.	.	.	.	.	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		T	P	N	N	.	.	.	.	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N
Template Known Secondary structure				B		.	.	.	.	S	S	T	T			B													G	G	G			T	T							S				T	T					T							T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		82	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions