Job Description P05459 Confidence 95.89% Date Thu Jan 5 10:58:44 GMT 2012 Rank 371 Aligned Residues 84 % Identity 19% Template c3nepX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:malate dehydrogenase; PDBTitle: 1.55a resolution structure of malate dehydrogenase from salinibacter2 ruber Resolution 1.55 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	.	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F
Query Conservation																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	V	T	V	I	G	A	G	N	V	G	A	T	V	A	E	C	V	A	R	Q	D	V	A	K	E	V	V	M	V	D	I	K	D	G	M	P	Q	G	K	A	L	D	M	R	E	S	S	P	I	H	G	F	D	T	R	V	T	G	T	N	D	Y	G	P	T	E	D	S	D	V	C	I	I	T	A	G	L	R
Template Known Secondary structure										S														T		S	S							S	S	T	T																	T									S	S	S	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		179	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		K	D	G	P	Y	K	T	L	H	L	A	D	E	.	.	.	.	.	.	.	.	.	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		D	D	.	.	.	.	.	.	.	L	L	A	K	N	T	E	I	V	G	G	V	T	E	Q	F	V	E	G	S	P	D	S	T	I	I	V	V	A
Template Known Secondary structure				.	.	.	.	.	.	.																		T	T		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions