Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 29 Aligned Residues 269 % Identity 24% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		I	L	V	D	E	N	M	P	Y	A	R	D	L	F	S	R	L	.	.	.	.	.	.	G	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.												.	.	.	.	.													.	.	.
Template Conservation																																				.	.	.	.	.													.	.	.
Template Sequence		I	I	F	Y	H	P	T	F	N	A	A	W	W	V	N	A	L	E	K	A	L	P	H	A	R	V	R	E	W	K	V	G	D	N	.	.	.	.	.	N	P	A	D	Y	A	L	V	W	Q	P	P	.	.	.	V	E	X	L	A	G	R	R	L	K	A	V	F	V	L	G	A	G	V	D	A	I	L	S	K	L
Template Known Secondary structure							S	S	S														T	T								T	T			.	.	.	.	.	S			S					S	S			.	.	.					T	T				S					S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.													.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	A	G	I	G	F	S	A	A	P	.	.	.	.	.	.	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R
Query Conservation														.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	H	P	E	X	L	D	A	S	I	P	L	F	R	L	E	D	T	G	X	G	L	Q	X	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	Q	A	L	K	N	Q	A	L	W	K	P	L	P	E	Y	T	R	E	E	F	S	V	G	I	X	G	A	G	V	L	G	A	K	V	A	E	S
Template Known Secondary structure					T	T	S	S		T	T	S								T	T																		T	T									T	T	T										S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	D	E	G	D	F	R	.	.	.	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V
Query Conservation																											.	.	.
Alig confidence																											.	.	.																						.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		L	Q	A	W	G	F	P	L	R	C	W	S	R	S	R	K	S	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q	T	R	V	L	I	N	L	L	P	N	T	A	Q	.	.	.	.	T	V	G	I	I	N	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A	R	G	V	H
Template Known Secondary structure				T	T	T								S	S					T	T						S	T	T	T							T		S										T	T	.	.	.	.	T	T	T		B	S						T	S		T	T							S		G	G	G
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																															.										.
Query SS confidence																															.										.
Query Sequence		V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q	H	V	A
Query Conservation																															.										.
Alig confidence																															.										.														.	.
Template Conservation																																																							.	.
Template Sequence		V	Q	E	A	D	L	L	A	A	L	D	S	G	K	L	K	G	A	X	L	D	V	F	S	Q	E	P	L	P	Q	E	S	P	L	W	R	H	P	R	V	A	X	T	P	H	I	A	A	V	T	R	P	A	.	.	E	A	I	D	Y	I	S	R	T	I	T	Q	L	E	K	G	E	P	V	T	G
Template Known Secondary structure		B												T	S							S			S	S	S	S			T	T		T	T	T	T		T	T					S	S		S							.	.															T	T				S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions