Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 8 Aligned Residues 292 % Identity 30% Template c3k5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.												.																.	.	.	.																					.
Query SS confidence											.												.																.	.	.	.																					.
Query Sequence		M	K	I	L	V	D	E	N	M	.	P	Y	A	R	D	L	F	S	R	L	G	.	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	L	.	.	.	.	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D
Query Conservation											.												.																.	.	.	.																					.
Alig confidence											.												.																.	.	.	.																					.
Template Conservation
Template Sequence		I	N	V	L	L	L	E	G	I	S	Q	T	A	V	E	Y	F	K	S	S	G	Y	T	N	V	T	H	L	P	K	A	L	D	K	A	D	L	I	K	A	I	S	S	A	H	I	I	G	I	R	S	R	T	Q	L	T	E	E	I	F	A	A	A	N	R	L	I	A	V	G	C	F	S	V	G	T	N	Q	V	E
Template Known Secondary structure		S						S													T	T								S	S												T	T		S						S	S			B									T	T								S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	A	R	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	I	I	M	L	M	R	R	I	F	P	R	S	V	S	A	H	A	G	G	W	E	K	T	A	I	G	S	R	E	V	R	G	K	T	L	G	I	V	G	Y	G	N	I	G	S	Q	V	G	N	L	A
Template Known Secondary structure								T	T							S	S	T	T																	T	T										T	T							T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	D	E	G	D	F	R	.	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N
Query Conservation																										.
Alig confidence																										.																		.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.
Template Sequence		E	S	L	G	M	T	V	R	Y	Y	D	T	S	D	K	L	Q	Y	G	N	V	K	P	A	A	S	L	D	E	L	L	K	T	S	D	V	V	S	L	H	V	P	.	.	.	.	.	.	.	.	.	S	K	L	I	T	E	A	K	L	R	K	M	K	K	G	A	F	L	I	N	N	A	R	G	S	D	V	D	L
Template Known Secondary structure				T	T								T	T					B	T	T	B				S	S									S								.	.	.	.	.	.	.	.	.				B								S		T	T							S		T	T	S	B
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.											.
Query SS confidence																											.	.	.	.	.											.
Query Sequence		T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	.	.	.	.	.	L	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q	H	V	A	L	D	T
Query Conservation																											.	.	.	.	.											.
Alig confidence																											.	.	.	.	.											.
Template Conservation
Template Sequence		E	A	L	A	K	V	L	Q	E	G	H	L	A	G	A	A	I	D	V	F	P	V	E	P	A	S	N	G	E	R	F	S	T	P	L	Q	G	L	E	N	V	I	L	T	P	H	I	G	G	S	T	E	E	A	Q	E	R	I	G	T	E	V	T	R	K	L	V	E	Y	S	D	V	G	S	T	V	G	A	V	N
Template Known Secondary structure										T	T	S										S	S			S	S	T	T	S					T	T	T	T		T	T						S		T	T																											T	T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	A	P	E	F	G	R	I	T	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	Q	V	Q	L	P	P	R	P	T	G	T
Template Known Secondary structure		S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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