Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 26 Aligned Residues 279 % Identity 24% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure											.											.	.	.	.																																				.
Query SS confidence											.											.	.	.	.																																				.
Query Sequence		K	I	L	V	D	E	N	M	P	.	Y	A	R	D	L	F	S	R	L	G	.	.	.	.	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A
Query Conservation											.											.	.	.	.																																				.
Alig confidence											.											.	.	.	.																									.	.										.																.
Template Conservation																																																		.	.																										.
Template Sequence		T	L	L	L	L	S	Q	D	N	A	H	Y	E	R	L	L	K	A	A	H	L	P	H	L	R	I	L	R	A	D	N	Q	S	D	A	E	K	L	I	G	E	A	H	I	L	M	A	E	.	.	P	A	R	A	K	P	L	L	A	K	A	N	K	L	S	W	F	Q	S	T	Y	A	G	V	D	.	V	L	L	D
Template Known Secondary structure							S	T	T											S			T	T							S	S								G	G	G		S						.	.					G	G	G	G	G	G		T	T							S	S	S			G	.	G	G	S
Template Predicted Secondary structure																																																		.	.																										.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	C	R	R	D	Y	Q	L	T	N	V	R	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I	A	H	T	G	K	H	F	G
Template Known Secondary structure		T	T	S			S	S							S																			T	T										T	T										S	T	T									S													T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A
Query Conservation																.	.	.
Alig confidence																.	.	.																												.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		M	K	V	L	G	V	S	R	S	G	R	E	R	A	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	.	.	.	.	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	I	L	F	N	V	G	R	G	N	A	I	N	E	G	D
Template Known Secondary structure									S	S					T	T		S					G	G	G							T		S										S	S	.	.	.	.	S	T	T	S	B		T	T	T	T	T		S		T	T							S		G	G	G	B
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.										.
Query SS confidence																										.										.
Query Sequence		L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q	H	V	A	L	D	T	L
Query Conservation																										.										.
Alig confidence																										.										.														.	.
Template Conservation																																																		.	.
Template Sequence		L	L	T	A	L	R	T	G	K	L	G	M	A	V	L	D	V	F	E	Q	E	P	L	P	A	D	S	P	L	W	G	Q	P	N	L	I	I	T	P	H	N	S	A	Y	S	F	P	D	.	.	D	V	A	Q	I	F	V	R	N	Y	I	R	F	I	D	G	Q	P	L	D	G	K	I	D	F
Template Known Secondary structure								T	T	S	S	S					S			S	S	S	S			T	T		T	T	T	T		T	T						S		S	S						.	.															T	T				T	T	B
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions