Job Description P05459 Confidence 98.11% Date Thu Jan 5 10:58:44 GMT 2012 Rank 144 Aligned Residues 141 % Identity 16% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.													.	.
Query SS confidence																																							.	.	.	.	.	.													.	.
Query Sequence		A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	.	.	.	.	.	.	F	S	L	Y	D	R	T	V	G	I	V	G	.	.	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D
Query Conservation																																							.	.	.	.	.	.													.	.
Alig confidence																									.	.													.	.	.	.	.	.													.	.
Template Conservation																									.	.
Template Sequence		E	M	A	Q	H	A	S	V	P	C	I	N	A	L	D	D	F	G	H	P	L	Q	M	.	.	V	C	D	F	M	T	I	K	E	K	F	T	A	A	G	E	F	S	N	G	F	K	G	I	K	F	A	Y	C	G	D	S	M	N	N	V	T	Y	D	L	M	R	G	C	A	L	L	G	M	E	C	H	V	C	C
Template Known Secondary structure								S	S					S	S		S	S							.	.														T	T			T	T	T	G	G	G							S			S	S														T
Template Predicted Secondary structure																									.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		147	.	.	150	.	.	.	.																					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		P	P	R	A	D	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	.	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S	I	K	I	F	H	D	C	K	K	G	C	E	G	V	D	V	V	Y	T	D	S	W	M	K	E	A	R	L	K	V	L	T	P	F	Q	V	D	D	A	V	M	A	V	T	S	K	R	S	I	F	M	N
Template Known Secondary structure			S	S	G	G	G	S																	T									S	S						T	T		S											T						G	G	G		B						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		206	.				.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		A	C	.	.	.	R	G	A	V	V	D	N	T	A	L
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		C	L	P	A	T	R	G	E	E	Q	T	A	S	V	I
Template Known Secondary structure			S				T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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