Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 19 Aligned Residues 278 % Identity 25% Template c3gg9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein; PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.			.	.
Predicted Secondary structure																	.	.	.	.	.																				.	.	.	.										.													.											.	.
Query SS confidence																	.	.	.	.	.																				.	.	.	.										.													.											.	.
Query Sequence		M	K	I	L	V	D	E	N	M	P	Y	A	R	D	L	.	.	.	.	.	F	S	R	L	G	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	.	.	.	.	L	A	D	A	D	A	L	M	V	.	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	.	.	T	A
Query Conservation																	.	.	.	.	.																				.	.	.	.										.													.											.	.
Alig confidence																	.	.	.	.	.																				.	.	.	.										.													.											.	.
Template Conservation
Template Sequence		L	K	I	A	V	L	D	D	Y	Q	D	A	V	R	K	L	D	C	F	S	L	L	Q	D	H	E	V	K	V	F	N	N	T	V	K	G	V	G	Q	L	A	A	R	V	A	D	V	E	A	L	V	L	I	R	E	R	T	R	V	T	R	Q	L	L	D	R	L	P	K	L	K	I	I	S	Q	T	G	R	V	S
Template Known Secondary structure										T	T			G	G	G	S	G	G	G	G	G	G	T	T	S							S				S								T	T	T		S						T	T	S	S		B						T	T		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																													110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	D	H	V	D	E	A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	S	L	Y	D	R	T	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		R	D	G	H	I	D	L	E	A	C	T	D	K	G	V	V	V	L	E	G	K	G	.	S	P	V	A	P	A	E	L	T	W	A	L	V	M	A	A	Q	R	R	I	P	Q	Y	V	A	S	L	K	H	G	A	W	Q	Q	S	G	L	K	S	T	T	M	P	P	N	F	G	I	G	R	V	L	K	G	Q	T	L
Template Known Secondary structure						B								T	T									.		S																T	T										T	T		T	T							T	T	S		T	T	T	T	S					T	T
Template Predicted Secondary structure																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.																												.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		G	I	F	G	Y	G	K	I	G	Q	L	V	A	G	Y	G	R	A	F	G	M	N	V	L	V	W	G	R	E	N	S	K	E	R	A	R	A	D	G	F	A	V	A	E	S	K	D	A	L	F	E	Q	S	D	V	L	S	V	H	L	R	L	N	D	E	.	.	.	.	T	R	S	I	I	T	V	A	D	L	T
Template Known Secondary structure							S													T	T								S										T	T					S										S									S	T	T	.	.	.	.	T	T	T		B						T
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																															.										.
Query SS confidence																																															.										.
Query Sequence		S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A
Query Conservation																																															.										.
Alig confidence																																															.										.
Template Conservation
Template Sequence		R	M	K	P	T	A	L	F	V	N	T	S	R	A	E	L	V	E	E	N	G	M	V	T	A	L	N	R	G	R	P	G	M	A	A	I	D	V	F	E	T	E	P	I	L	Q	G	H	T	L	L	R	M	E	N	C	I	C	T	P	H	I	G	Y	V	E	R	E	S	Y	E	M	Y	F	G	I	A	F	Q	N
Template Known Secondary structure		T	S		T	T							S		G	G	G	B		T	T									T	S	S	S								S	S	S	S			T	T		T	T	T	T		T	T						S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	K	F	I	G	H	E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	D	I	L	Q	G	N	V	D
Template Known Secondary structure						T	T	T			T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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