Job Description P05459 Confidence 94.59% Date Thu Jan 5 10:58:44 GMT 2012 Rank 438 Aligned Residues 80 % Identity 24% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	.	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	.	.	.	.	.	.	Y
Template Known Secondary structure								S													T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.							.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I
Template Known Secondary structure															S	S	S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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