Job Description P05459 Confidence 94.33% Date Thu Jan 5 10:58:44 GMT 2012 Rank 451 Aligned Residues 60 % Identity 23% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		114	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.															.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure												.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	D	R	T	V	G	I	V	G	.	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	.	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F
Query Conservation												.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	L	T	D	A	K	Y	I	V	S
Template Known Secondary structure		S		S	S						S	T	T	S													T	T			S							S																		T	T							S							T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions