Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 25 Aligned Residues 276 % Identity 24% Template c3evtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from2 lactobacillus plantarum Resolution 2.20 Å

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		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		I	L	V	D	E	N	M	P	.	.	Y	A	R	D	L	F	S	R	L	G	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W	L	K	Q	A
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		V	L	M	A	Q	A	T	K	P	E	Q	L	Q	Q	L	Q	T	T	Y	P	D	W	T	F	K	D	A	A	A	V	T	A	A	D	Y	D	Q	I	E	V	M	Y	G	N	H	P	L	L	K	T	I	L	A	R	P	T	N	Q	L	K	F	V	Q	V	I	S	A	G	V	D	Y	L	P	L	K	A	L	Q	A	A
Template Known Secondary structure						S															T	T						T	T	S			T	T	T	G	G	G						S			T								S	T	T									S	S	S			T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	V	V	A	N	T	S	G	I	H	A	D	A	I	S	E	S	V	L	A	A	M	L	S	V	V	R	G	Y	H	A	A	W	L	N	Q	R	G	A	R	Q	W	A	L	P	M	T	T	S	T	L	T	G	Q	Q	L	L	I	Y	G	T	G	Q	I	G	Q	S	L	A	A	K	A	S	A	L	G	M	H	V
Template Known Secondary structure		T							T	T																			T	T									T	T	T			S	S		S	S					S	T	T									S													T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		L	L	C	D	P	P	R	A	D	R	G	D	E	.	.	.	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T
Query Conservation															.	.	.
Alig confidence															.	.	.																										.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		I	G	V	N	T	T	G	H	P	A	D	H	F	H	E	T	V	A	F	T	A	T	A	D	A	L	A	T	A	N	F	I	V	N	A	L	P	L	T	P	T	.	.	.	.	T	H	H	L	F	S	T	E	L	F	Q	Q	T	K	Q	Q	P	M	L	I	N	I	G	R	G	P	A	V	D	T	T	A	L	M	T
Template Known Secondary structure						S	S					T	T		S					G	G	G									S										G	G	.	.	.	.	G	T	T		B	S						T			S								S		G	G	G	B
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																							.										.
Query SS confidence																							.										.
Query Sequence		C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q
Query Conservation																							.										.
Alig confidence																							.										.
Template Conservation
Template Sequence		A	L	D	H	H	Q	L	S	M	A	A	L	D	V	T	E	P	E	P	L	P	T	D	H	P	L	W	Q	R	D	D	V	L	I	T	P	H	I	S	G	Q	I	A	H	F	R	A	T	V	F	P	I	F	A	A	N	F	A	Q	F	V	K	D	G	T
Template Known Secondary structure					T	T	S		S					S	S		S	S	S	S			T	T		G	G	G	G		S	S						S		T	T																								S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions