Job Description P05459 Confidence 97.62% Date Thu Jan 5 10:58:44 GMT 2012 Rank 204 Aligned Residues 148 % Identity 14% Template c3d6nB_ PDB info PDB header:hydrolase/transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: crystal structure of aquifex dihydroorotase activated by aspartate2 transcarbamoylase Resolution 2.30 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																											.	.	.
Query SS confidence																						.																																											.	.	.
Query Sequence		V	G	T	A	T	A	G	T	D	H	V	D	E	A	W	L	K	Q	A	G	.	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	.	.	.	V	G	N	V	G	R	R	L	Q	A	R	L	E	A
Query Conservation																						.																																											.	.	.
Alig confidence																						.																	.														.												.	.	.
Template Conservation																																							.														.
Template Sequence		Y	V	V	F	R	V	P	F	V	F	F	P	Y	K	E	I	V	K	S	L	N	L	R	L	V	N	A	G	D	G	T	H	Q	H	P	S	Q	.	G	L	I	D	F	F	T	I	K	E	H	F	G	.	E	V	K	D	L	R	V	L	Y	V	G	D	I	K	H	S	R	V	F	R	S	G	A	P	L	L	N	M
Template Known Secondary structure								S	S				S							T		S	S								T	T	T	B					.													S	.			T	T							S			T	T
Template Predicted Secondary structure																																							.														.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		138	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.		.	.	.	.	200	.	.
Predicted Secondary structure															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.									.
Query SS confidence															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.									.
Query Sequence		L	G	I	K	T	L	L	C	D	P	P	R	A	.	.	.	.	.	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	.	.	.	.	.	.	.	.	.	L	A	D	E	K	L	I	R	.	S	L	K	P	G	A	I
Query Conservation															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.									.
Alig confidence															.	.	.	.	.																							.	.	.	.												.	.	.	.	.	.	.	.	.									.
Template Conservation																																										.	.	.	.
Template Sequence		F	G	A	K	I	G	V	C	G	P	K	T	L	I	P	R	D	V	E	V	F	K	V	D	V	F	D	D	V	D	K	G	I	D	W	A	D	V	V	I	.	.	.	.	W	L	R	L	Q	K	E	R	Q	K	E	N	Y	I	P	S	E	S	S	Y	F	K	Q	F	G	L	T	K	E	R	F	E	K	V	K	L
Template Known Secondary structure		T	T							S		G	G	G	S		T	T	G	G	G	G						S	S									S				.	.	.	.						T					T	T	S	S	S										S	B						T	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		203	.	.	.	.				.	.	210	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		L	I	N	A	C	.	.	.	R	G	A	V	V	D	N	T
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		Y	M	H	P	G	P	V	N	R	N	V	D	I	D	H	E
Template Known Secondary structure					S	S				B	T	T	T	B		G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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