Job Description P05459 Confidence 97.26% Date Thu Jan 5 10:58:44 GMT 2012 Rank 238 Aligned Residues 119 % Identity 19% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.																.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	K	T	L	L	C	D	P	P	R	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	D	E	G	D	F	R	S	L	D	E
Query Conservation																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	G	F	G	R	G	M	E	E	G	L	P	N	A	K	L	D	S	V	V	Q	V	G	A	G	G	V	G	N	A	V	A	Y	A	L	V	T	H	G	V	Q	K	L	Q	V	A	D	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V	G	R	E	A	V	V	G	V	D	A	R	G	I	E	D
Template Known Secondary structure														T	T				S								S	T	T											T	T		S							S	S																T	S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G
Query Conservation
Alig confidence																					.	.							.	.	.																				.
Template Conservation																					.	.							.	.	.																				.
Template Sequence		V	I	A	A	A	D	G	V	V	N	A	T	P	M	G	M	P	A	H	.	.	P	G	T	A	F	D	.	.	.	V	S	C	L	T	K	D	H	W	V	G	D	V	V	Y	M	P	I	E	.	T	E	L	L	K	A	A	R	A	L	G
Template Known Secondary structure						S	S						S	S	T	T	S	T	T	S	.	.		S		S	S		.	.	.	G	G	G			T	T						S			S	S	S	S	.											T
Template Predicted Secondary structure																					.	.							.	.	.																				.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions