Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 6 Aligned Residues 274 % Identity 24% Template c2nacA_ PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.											.	.	.	.																.	.											.
Query SS confidence																		.											.	.	.	.																.	.											.
Query Sequence		V	D	E	N	M	P	Y	A	R	D	L	F	S	R	L	G	.	E	V	T	A	V	P	G	R	P	I	.	.	.	.	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	.	.	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W
Query Conservation																		.											.	.	.	.																.	.											.
Alig confidence																		.											.	.	.	.																.	.											.
Template Conservation
Template Sequence		S	V	S	G	E	L	G	L	R	K	Y	L	E	S	N	G	H	T	L	V	V	T	S	D	K	D	G	P	D	S	V	F	E	R	E	L	V	D	A	D	V	V	I	S	Q	P	F	W	P	A	Y	L	T	P	E	R	I	A	K	A	K	N	L	K	L	A	L	T	A	G	I	G	S	D	H	V	D	L	Q	S
Template Known Secondary structure		B	T	T	T	G	G	G								T	T							S			S	S	T	T	S							T	T		S					B	T	T	B				B									T	T							S	S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	D	R	N	V	T	V	A	E	V	T	Y	C	N	S	I	S	V	A	E	H	V	V	M	M	I	L	S	L	V	R	N	Y	L	P	S	H	E	W	A	R	K	G	G	W	N	I	A	D	C	V	S	H	A	Y	D	L	E	A	M	H	V	G	T	V	A	A	G	R	I	G	L	A	V	L	R	R	L	A
Template Known Secondary structure					T	T							T	T	T	T																	T	T										T	T									T	T					T	T									S											G
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																												.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		P	F	D	V	H	L	H	Y	T	D	R	H	R	L	P	E	S	V	E	K	E	L	N	L	T	W	H	A	T	R	E	D	M	Y	P	V	C	D	V	V	T	L	N	C	P	L	H	P	E	.	.	.	.	T	E	H	M	I	N	D	E	T	L	K	L	F	K	R	G	A	Y	I	V	N	T	A	R	G	K	L
Template Known Secondary structure		G	G	T								S	S											T					S	S					G	G	G		S						S				T	T	.	.	.	.	T	T	T		B	S					T	T	S		T	T							S		G	G	G
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																															.										.
Query SS confidence																															.										.
Query Sequence		V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q
Query Conservation																															.										.
Alig confidence																															.										.
Template Conservation
Template Sequence		C	D	R	D	A	V	A	R	A	L	E	S	G	R	L	A	G	Y	A	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	T	M	P	Y	N	G	M	T	P	H	I	S	G	T	T	L	T	A	Q	A	R	Y	A	A	G	T	R	E	I	L	E	C	F	F	E	G	R	P
Template Known Secondary structure		B											T	T	S							S			S	S	S	S			T	T		G	G	G	T	S	T	T	B					S		T	T		S																					T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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