Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 23 Aligned Residues 282 % Identity 27% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.								.	.	.																				.	.										.
Query SS confidence																		.								.	.	.																				.	.										.
Query Sequence		V	D	E	N	M	P	Y	A	R	D	L	F	S	R	L	G	.	E	V	T	A	V	P	G	.	.	.	R	P	I	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	.	.	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W	L
Query Conservation																		.								.	.	.																				.	.										.
Alig confidence																		.								.	.	.																				.	.										.
Template Conservation
Template Sequence		C	T	E	N	K	L	G	I	A	N	W	L	K	D	Q	G	H	E	L	I	T	T	S	D	K	E	G	N	S	V	L	D	Q	H	I	P	D	A	D	I	I	I	T	T	P	F	H	P	A	Y	I	T	K	E	R	I	D	K	A	K	K	L	K	L	V	V	V	A	G	V	G	S	D	H	I	D	L	D	Y	I
Template Known Secondary structure		B	T	T	T	G	G	G								T	T							S												G	G	G		S						T	T	S				B									T	T							S	S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		78	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	A	G	.	.	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L
Query Conservation						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	T	G	K	K	I	S	V	L	E	V	T	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A	G	R	I	G	Y	R	V	L	E	R	L
Template Known Secondary structure					T									T	T	S	S																	T	T										T	T									T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	.	.	.	.	.	.	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																															.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		V	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	D	I	V	T	V	N	A	P	L	H	A	G	.	.	.	.	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W	L	V	N	T	A	R	G
Template Known Secondary structure		G	G	G			S							S	S											T					S	S									S									S	T	T	.	.	.	.	T	T	T		B						T	T	S		T	T							S		G
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																	.											.	.	.	.	.	.
Query SS confidence																																	.											.	.	.	.	.	.
Query Sequence		A	V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	I	.	.	.	.	.	.	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q
Query Conservation																																	.											.	.	.	.	.	.
Alig confidence																																	.											.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	D	M	R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	S	G	T	T	L	D	A	Q	T	R	Y	A	Q	G	T	V	N	I	L	E	S	F	F	T	G	K	F
Template Known Secondary structure		G	G	B												T	S							S			S	S	S	S			T	T									T	T	S								S		G	G	G	S																				T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	A	L	D	T	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	R	P	Q	D	I	I
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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