Job Description P05459 Confidence 97.76% Date Thu Jan 5 10:58:44 GMT 2012 Rank 186 Aligned Residues 127 % Identity 15% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		W	I	G	F	L	K	S	L	K	S	L	I	P	E	V	K	E	K	S	I	L	V	L	G	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	K	V	F	L	W	N	R	T	K	E	K	A	I	K	L	A	Q	K	F	P	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N
Template Known Secondary structure										T	T	T		S			T	T									S													T	T								S	S											S						S		G	G	G	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W
Query Conservation
Alig confidence													.	.									.	.	.														.	.	.
Template Conservation													.	.									.	.	.														.	.	.
Template Sequence		T	T	S	V	G	L	K	D	E	D	P	.	.	E	I	F	N	Y	D	L	I	.	.	.	K	K	D	H	V	V	V	D	I	I	Y	K	E	.	.	.	T	K	L	L	K	K	A	K	E	K	G	A	K	L	L	D	G	L	P	M	L
Template Known Secondary structure			S	S	T	T	S	S	T	T			.	.		S	S		G	G	G		.	.	.		T	T							S	S	S		.	.	.										T	T						S
Template Predicted Secondary structure													.	.									.	.	.														.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions