Return to main results Retrieve Phyre Job Id

Job DescriptionP05459
Confidence97.01%DateThu Jan 5 10:58:44 GMT 2012
Rank267Aligned Residues91
% Identity18%Templatec2hjrK_
PDB info PDB header:oxidoreductaseChain: K: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of cryptosporidium parvum malate2 dehydrogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140 .........150... ......160.........170.........
Predicted Secondary structure 






.







................










Query SS confidence 























.












. . . . . . . . . . . . . . . .

























Query Sequence  RTVGIVGVGNVGRRLQARLEALGI. KTLLCDPPRADRG. . . . . . . . . . . . . . . . DEGDFRSLDELVQRADILTFHTPLFK
Query Conservation 






 
 

  

  
 


 . 
   

      ................       
 


  






 


 
Alig confidence 























.












................

























Template Conservation   

 




 

   
  
      

 
 
           

            
    
 


  





      
Template Sequence  KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVIITAGVPR
Template Known Secondary structure 


STT
S
SSTTT



S
GGGGTT
S

S


Template Predicted Secondary structure 

























Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   180.........190.. .......200.......
Predicted Secondary structure 










.........





Query SS confidence 












. . . . . . . . .














Query Sequence  DGPYKTLHLADEK. . . . . . . . . LIRSLKPGAILINAC
Query Conservation   
   
  


  ......... 
  

 





 
Alig confidence 












.........














Template Conservation       
   
  
  
   
   
    
 
 

  
Template Sequence  KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT
Template Known Secondary structure 
TT

SGGG
TTS

Template Predicted Secondary structure 








Template SS confidence 




































   95....100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions