Job Description P05459 Confidence 96.22% Date Thu Jan 5 10:58:44 GMT 2012 Rank 352 Aligned Residues 127 % Identity 15% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H
Query Conservation																																																								.	.	.	.	.
Alig confidence																						.																																		.	.	.	.	.												.
Template Conservation																						.																																																		.
Template Sequence		A	P	G	F	L	E	A	L	K	A	G	G	I	P	L	K	G	P	A	L	.	V	L	G	A	G	G	A	G	R	A	V	A	F	A	L	R	E	A	G	L	E	V	W	V	W	N	R	T	P	Q	R	A	L	A	L	A	E	E	F	G	L	R	A	V	P	L	E	K	A	.	R	E	A	R	L	L	V	N	A
Template Known Secondary structure												T	T					S				.					S													T	T								S	S												T						G	G	G	G	.	G	G		S
Template Predicted Secondary structure																						.																																																		.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W
Query Conservation
Alig confidence										.	.										.	.	.															.
Template Conservation										.	.										.	.	.															.
Template Sequence		T	R	V	G	L	E	D	P	.	.	S	A	S	P	L	P	A	E	L	.	.	.	F	P	E	E	G	A	A	V	D	L	V	Y	R	P	.	L	W	T	R	F	L	R	E	A	K	A	K	G	L	K	V	Q	T	G	L	P	M	L
Template Known Secondary structure		S	S	T	T	T	T		T	.	.	T			S	S		G	G	G	.	.	.			S	S						S			S	S	.	S	S										T	T						S
Template Predicted Secondary structure										.	.										.	.	.															.
Template SS confidence
		179	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions