Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 13 Aligned Residues 280 % Identity 26% Template c2eklA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: structure of st1218 protein from sulfolobus tokodaii Resolution 1.77 Å

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		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.	.																	.	.																														.
Query SS confidence												.	.																	.	.																														.
Query Sequence		M	K	I	L	V	D	E	N	M	P	.	.	Y	A	R	D	L	F	S	R	L	G	E	V	T	A	V	P	.	.	G	R	P	I	P	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A
Query Conservation												.	.																	.	.																														.
Alig confidence												.	.																	.	.																														.
Template Conservation
Template Sequence		V	K	A	L	I	T	D	P	I	D	E	I	L	I	K	T	L	R	E	K	G	I	Q	V	D	Y	M	P	E	I	S	K	E	E	L	L	N	I	I	G	N	Y	D	I	I	V	V	R	S	R	T	K	V	T	K	D	V	I	E	K	G	K	K	L	K	I	I	A	R	A	G	I	G	L	D	N	I	D	T	E
Template Known Secondary structure								S													T	T							T	T										G	G	G		S						S	S	S		B									T	T								S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	E	K	R	N	I	K	V	V	Y	A	P	G	A	S	T	D	S	A	V	E	L	T	I	G	L	M	I	A	A	A	R	K	M	Y	T	S	M	A	L	A	K	S	G	I	F	K	K	I	E	G	L	E	L	A	G	K	T	I	G	I	V	G	F	G	R	I	G	T	K	V	G	I	I	A	N	A	M	G
Template Known Secondary structure						T	T							T	T	T	T																		T										T	T											T	T							S		S													T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A
Query Conservation																.	.	.
Alig confidence																.	.	.																												.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		M	K	V	L	A	Y	D	I	L	D	I	R	E	K	A	E	K	I	N	A	K	A	V	S	L	E	E	L	L	K	N	S	D	V	I	S	L	H	V	T	V	S	K	D	.	.	.	.	A	K	P	I	I	D	Y	P	Q	F	E	L	M	K	D	N	V	I	I	V	N	T	S	R	A	V	A	V	N	G	K	A
Template Known Secondary structure									S	S									T	T														S										T	T	.	.	.	.	S			S	B								S		T	T						S	S		G	G	G	B
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																												.	.	.								.
Query SS confidence																												.	.	.								.
Query Sequence		L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	N	V	.	.	.	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q	H	V
Query Conservation																												.	.	.								.
Alig confidence																												.	.	.								.
Template Conservation
Template Sequence		L	L	D	Y	I	K	K	G	K	V	Y	A	Y	A	T	D	V	F	W	N	E	P	P	K	E	E	W	E	L	E	L	L	K	H	E	R	V	I	V	T	T	H	I	G	A	Q	T	K	E	A	Q	K	R	V	A	E	M	T	T	Q	N	L	L	N	A	M	K	E	L	G	M	I
Template Known Secondary structure								T	T								S			S	S	S	S			S									S	T	T						S		T	T		S																						T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions