Job Description P05459 Confidence 97.77% Date Thu Jan 5 10:58:44 GMT 2012 Rank 183 Aligned Residues 126 % Identity 15% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.												.	150	.	.	.	.	.	.
Predicted Secondary structure																																																						.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	K	T	L	L	C	D	P	P	.	.	.	.	.	.	.	.	.	.	.	R	A	D	R	G	D	E	G
Query Conservation																																																						.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																																										.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		G	Y	N	T	D	G	.	.	.	.	.	L	G	Y	V	Q	A	L	E	E	E	M	N	I	T	L	D	G	K	R	I	L	V	I	G	A	G	G	G	A	R	G	I	Y	F	S	L	L	S	T	A	A	E	R	I	D	M	A	N	R	T	V	E	K	A	E	R	L	V	R	E	G	D	E	R	R	S	A	Y	F
Template Known Secondary structure								.	.	.	.	.											T	T				T	T									S												T	T	T		S							S	S											S		S	S	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L	T	C	L	N	E	G
Query Conservation
Alig confidence																										.	.	.	.																												.
Template Conservation																										.	.	.	.																												.
Template Sequence		S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T	S	V	G	M	H	.	.	.	.	P	R	V	E	V	Q	P	L	S	L	E	R	L	R	P	G	V	I	V	S	D	I	I	Y	N	P	L	.	E	T	K	W	L	K	E	A	K	A	R	G
Template Known Secondary structure									T	G	G	G		S						S		T	T		S	.	.	.	.	S			S			S	S			T	T			T	T									S	S	S	.	S										T	T
Template Predicted Secondary structure																										.	.	.	.																												.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions