Job Description P05459 Confidence 99.94% Date Thu Jan 5 10:58:44 GMT 2012 Rank 46 Aligned Residues 199 % Identity 18% Template c2eezG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:alanine dehydrogenase; PDBTitle: crystal structure of alanine dehydrogenase from themus thermophilus Resolution 2.71 Å

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		1	.	.	.	.	.		.	.	.	10											.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure								.					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	L	V	D	.	E	N	M	P	.	.	.	.	.	.	.	.	.	.	Y	A	R	D	L	F	S	R	L	G	E	V	T	A	V	P	G	R	P	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S
Query Conservation								.					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																									.
Template Sequence		M	V	I	G	V	P	K	E	I	K	T	L	E	N	R	V	A	L	T	P	G	G	V	E	S	L	V	R	R	G	H	T	V	L	V	E	R	G	A	G	E	G	S	G	L	S	D	A	E	Y	A	R	A	G	A	E	L	V	G	R	E	E	A	W	G	A	E	M	V	V	K	.	V	K	E	P	L	P	E	E
Template Known Secondary structure											S	T	T					S												T	T							T	T	T	T	G	G	G	T									T	T										T	T	S	S					.	S	S				G	G	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
		53	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure					.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	F	L	R	E	G	L	I	L	F	T	Y	L	H	L	A	A	D	R	G	L	T	E	A	M	L	R	S	G	V	T	G	I	A	Y	E	T	V	Q	L	P	D	G	T	L	P	L	L	V	P	M	S	E	V	A	G	R	M	A	P	Q	V	G	A	Q	F	L	E	K	P	K	G	G	R	G	V	L	L	G
Template Known Secondary structure		G	G	G			T	T									G	G	G												T						G	G	G				T	T	S			T	T	T																			T	S	G	G	G	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
			111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	.	.	.	.	.	.	.	.	.	.	.	.	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L
Query Conservation		.																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																										.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	V	P	G	V	A	P	A	S	V	V	I	L	G	G	G	T	V	G	T	N	A	A	K	I	A	L	G	M	G	A	Q	V	T	I	L	D	V	N	H	K	R	L	Q	Y	L	D	D	V	F	G	G	R	V	I	T	L	T	A	T	E	A	N	I	K	K	S	V	Q	H	A	D	L	L	I	G	A	.	.	.
Template Known Secondary structure			B	T	T	B											S													T	T								S												T	T	T		S																T		S						.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	V	L	K	L	V	T	R	D	M	L	S	L	M	K	E	G	A	V	I	V	D	V	A	Y	V	V
Template Known Secondary structure		.	.	.	.	.	.	.					S						T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions