Job Description P05459 Confidence 94.57% Date Thu Jan 5 10:58:44 GMT 2012 Rank 439 Aligned Residues 62 % Identity 26% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																								.										.	.	.									.	.	.	.													.
Query SS confidence																								.										.	.	.									.	.	.	.													.
Query Sequence		Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	.	A	L	G	I	K	T	L	L	C	.	.	.	D	P	P	R	A	D	R	G	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	.	Q	R	A	D	I	L	T	F	H	T	P
Query Conservation																								.										.	.	.									.	.	.	.													.
Alig confidence																								.										.	.	.									.	.	.	.													.
Template Conservation
Template Sequence		R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P
Template Known Secondary structure		S										S										S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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