Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 21 Aligned Residues 295 % Identity 25% Template c2d0iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3 Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.																							.	.																								.
Query SS confidence											.																							.	.																								.
Query Sequence		K	I	L	V	D	E	N	M	P	.	Y	A	R	D	L	F	S	R	L	G	E	V	T	A	V	P	G	R	P	I	P	V	.	.	A	Q	L	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	K	F	V	G	T	A	T	A	G	T	D	H	V	D	E	A	W	L
Query Conservation											.																							.	.																								.
Alig confidence											.																							.	.																								.
Template Conservation
Template Sequence		K	V	G	V	L	L	K	M	K	R	E	A	L	E	E	L	K	K	Y	A	D	V	E	I	I	L	Y	P	S	G	E	E	L	K	G	V	I	G	R	F	D	G	I	I	V	S	P	T	T	K	I	T	R	E	V	L	E	N	A	E	R	L	K	V	I	S	C	H	S	A	G	Y	D	N	I	D	L	E	E	A
Template Known Secondary structure							S														S							S								T	T	G	G	G		S						T	T	S		B						T	T		T	T							S	S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	R	G	I	Y	V	T	K	V	S	G	L	L	S	E	A	V	A	E	F	T	V	G	L	I	I	N	L	M	R	K	I	H	Y	A	D	K	F	I	R	R	G	E	W	E	S	H	A	K	I	W	T	G	F	K	R	I	E	S	L	Y	G	K	K	V	G	I	L	G	M	G	A	I	G	K	A	I	A	R
Template Known Secondary structure				T	T																																						T	T										T	T	S						S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A
Query Conservation																						.	.	.
Alig confidence																						.	.	.																												.	.	.	.															.
Template Conservation																																																				.	.	.	.															.
Template Sequence		R	L	I	P	F	G	V	K	L	Y	Y	W	S	R	H	R	K	V	N	V	E	K	E	L	K	A	R	Y	M	D	I	D	E	L	L	E	K	S	D	I	V	I	L	A	L	P	L	T	R	D	.	.	.	.	T	Y	H	I	I	N	E	E	R	V	K	K	L	E	.	G	K	Y	L	V	N	I	G	R	G	A
Template Known Secondary structure				G	G	G	T								T	T																								S										T	T	.	.	.	.	T	T	T	T	B								T	T	.	T							S		G	G
Template Predicted Secondary structure																																																				.	.	.	.															.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.										.
Query SS confidence																																.										.
Query Sequence		V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A	Y	S	K	F	I	G	H	E	Q	H	V	A	L	D	T
Query Conservation																																.										.
Alig confidence																																.										.
Template Conservation
Template Sequence		L	V	D	E	K	A	V	T	E	A	I	K	Q	G	K	L	K	G	Y	A	T	D	V	F	E	K	E	P	V	R	E	H	E	L	F	K	Y	E	W	E	T	V	L	T	P	H	Y	A	G	L	A	L	E	A	Q	E	D	V	G	F	R	A	V	E	N	L	L	K	V	L	R	G	E	V	P	E	D	L	V	N
Template Known Secondary structure		G	B											T	T		S	S					S			S	S	S	S		S			G	G	G	G		T	T	T						S		T	T																						T	T				T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	A	P	E	F	G	R	I	T	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	L	E	V	R	P	I	E	N	V	K
Template Known Secondary structure		T	T					S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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