Job Description P05459 Confidence 97.89% Date Thu Jan 5 10:58:44 GMT 2012 Rank 167 Aligned Residues 125 % Identity 14% Template c2bmaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs Resolution 2.7 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	T	G	Y	G	L	V	Y	F	V	L	E	V	L	K	S	L	N	I	P	V	E	K	Q	T	A	V	V	S	G	S	G	N	V	A	L	Y	C	V	Q	K	L	L	H	L	N	V	K	V	L	T	L	S	D	S	N	G	Y	V	Y	E	P	N	G	F	T	H	E	N	L	E	F	L	I	D	L	K	E
Template Known Secondary structure		T	T																T	T	T			G	G	G								S	S													T	T									T	T						S	S															T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
								147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.																																			.	.
Query SS confidence		.	.	.	.	.	.																					.																																			.	.
Query Sequence		.	.	.	.	.	.	P	P	R	A	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	.	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	.	.	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L
Query Conservation		.	.	.	.	.	.																					.																																			.	.
Alig confidence		.	.	.	.	.	.																					.										.	.	.	.	.	.	.	.	.																	.	.												.
Template Conservation																																						.	.	.	.	.	.	.	.	.																														.
Template Sequence		E	K	K	G	R	I	K	E	Y	L	N	H	S	S	T	A	K	Y	F	P	N	E	K	P	W	G	V	P	C	T	L	A	F	P	C	A	.	.	.	.	.	.	.	.	.	T	Q	N	D	V	D	L	D	Q	A	K	L	L	Q	K	N	G	C	I	L	V	G	E	G	A	N	M	P	S	.	T	V	D	A	I
Template Known Secondary structure		T	T	T			G	G	G	G	G	G	T		S	S					S	S			T	T	S	S			S						S	.	.	.	.	.	.	.	.	.	S	T	T		B		S									T	T								S	S	S		B	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.										.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.
		218	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	C	L	N	E	G	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	F	K	S	N	N	I	I
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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